Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  212 bits (540), Expect = 3e-59
 Identities = 121/370 (32%), Positives = 210/370 (56%), Gaps = 2/370 (0%)

Query: 273 VFVDKATALADVDVAVANAITTGIVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSG 332
           V+VD   A     +  A     GIVLI   V +++ I+  I +PL     A+  +A G  
Sbjct: 176 VYVDDVAAEFKTQLWNAGMFIAGIVLI--MVLLLVTIVRSIVRPLRAAVGAMASIASGES 233

Query: 333 DLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQML 392
           DLTR LE +GND++ ++   FN F   L+N++ Q+  +   +  +   L   A++ +   
Sbjct: 234 DLTRTLETHGNDEITELGTHFNAFVAKLRNVVGQLQHSAVALGQASTDLGSDAEQAQSRS 293

Query: 393 ISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLV 452
              S + D V TA+ +++   + VA++   +      A  +AQQ  + ++N++  +  L 
Sbjct: 294 EQQSQQMDLVATAVNEVTYGVQDVAKNAEHAASEMRDAESQAQQGQINIDNSLRQIEHLS 353

Query: 453 NDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVAD 512
           + +    + + ++  ++ +I  VL VI +I+EQTNLLALNAAIEAARAGEQGRGFAVVAD
Sbjct: 354 STIGQAVQVMQSLASESTQIGSVLEVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 413

Query: 513 EVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSA 572
           EVR LA RTQ ST EI  M+ +L + +D+ V  +  + +  Q T ++ ++   SL  +S 
Sbjct: 414 EVRLLAQRTQKSTAEIQSMIERLQKHSDAAVKVIGDSSRSSQLTIEQANQAGQSLTSISQ 473

Query: 573 SVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHE 632
           ++ +++ L+  IA+AT QQ+ V  ++++N+    ++ +S  ++  Q+  A+  L   + E
Sbjct: 474 ALRNLNSLNASIASATLQQTHVVDDINQNVTQAAQLSQSTALAAEQSTSASLHLRGLSEE 533

Query: 633 LEQLVGKFKL 642
           L  L+ +F++
Sbjct: 534 LNTLLKQFRV 543