Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  218 bits (554), Expect = 8e-61
 Identities = 125/351 (35%), Positives = 205/351 (58%), Gaps = 2/351 (0%)

Query: 293 TTGIVLIGISVGVIIF-IINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISE 351
           TT   +I + V ++ F II  I  P+  +   +  + +   +LT R +  G D++A+I +
Sbjct: 271 TTLFAVIAVLVAIVTFMIIRAIITPINNINQVISHVGKDK-NLTLRCDTQGGDEIAEIGQ 329

Query: 352 GFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSE 411
            FN    + + ++ Q++DA  +++ S ++LS  A +    ++   +ETD V TAIT+M  
Sbjct: 330 HFNEMVESFRALIQQVNDAVNVMNESCQELSANATQASDGVLRQLNETDMVATAITEMGA 389

Query: 412 SARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANK 471
           +   +A++   + +        AQ     V   +  + SL   + N +  ++ + RD+  
Sbjct: 390 TIDEIAKNTELAAERANHTHTNAQVGQQSVEQTIEKIQSLAQQLNNSASVVAELERDSGT 449

Query: 472 ISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDM 531
           I  VL VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ ST EI+ +
Sbjct: 450 IGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGI 509

Query: 532 LTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQ 591
           +  L   T S+V  ME +++Q   +A++ +     L  ++  V++I D+STQIAAA E+Q
Sbjct: 510 IQTLQSRTRSIVQLMEASQRQGGESAEQAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQ 569

Query: 592 STVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
           S+VAAE+++N++ IR+I E    +      A++ +      L++ V +F++
Sbjct: 570 SSVAAEVNKNVVVIRDIAEESSHAAMANAKASDDVRERAEYLQRAVSQFRV 620