Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  228 bits (580), Expect = 7e-64
 Identities = 132/349 (37%), Positives = 210/349 (60%), Gaps = 4/349 (1%)

Query: 296 IVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNR 355
           +++ G  + +++ I   + +PL R  +A  ++A+G  +LT RLE  G D+L+Q+S  FN 
Sbjct: 208 LLVWGPVMALLLMISRSVTEPLQRTLMAFKNIAEGEANLTLRLEERGRDELSQVSVYFNA 267

Query: 356 FSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESART 415
           F G +Q++++ + D+          LS  A +      S   ET  V  AI QMS +A  
Sbjct: 268 FVGRIQSLVISVRDSVDHSRQLSSSLSNVAHQAAHATNSMQQETQSVAAAINQMSATASE 327

Query: 416 VAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEV 475
           VA +   + +  + A  +A  + ++V +A+  V  L +++E  SE    +   + +I ++
Sbjct: 328 VAANAQLAAKSAKNADSQADSTNLVVTHAMGNVRQLSSELEETSEIAKALKVSSGEIGQI 387

Query: 476 LSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKL 535
           L VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQ ST EI+ ++  +
Sbjct: 388 LDVIVGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLASRTQQSTQEINAIIEAI 447

Query: 536 LEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVA 595
               D V  ++ R +QQ   T D+T++V  +L ++  ++  I+D++ QIA AT++QS V 
Sbjct: 448 RGAVDKVNASVARARQQSDNTVDETAQVMDALGLIKQAIGQINDMNLQIATATDEQSAVI 507

Query: 596 AELSRNMLSIREI-VESLVVSGRQTVGAT-ESLSHSNHELEQLVGKFKL 642
           AEL+ N+  I EI VE+L  S  +TVG T + ++  + ++ QL+  FK+
Sbjct: 508 AELNENINRINEISVENL--SKSETVGHTSDRIAEDSRQMAQLIAVFKV 554