Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  251 bits (641), Expect = 8e-71
 Identities = 165/505 (32%), Positives = 274/505 (54%), Gaps = 34/505 (6%)

Query: 163 SAVSPILHQGQFVGALLGDFQLD---DIITQVSNMRF--AGGAATLTDKNAVFFASDDPN 217
           S + PI+  G F G +  D  ++   D++T      +  AG  A ++    +   + D +
Sbjct: 217 SFIEPIMIDGTFQGIVGADLSVNFIQDMLTSADQNLYNGAGELALISSNGRLVAYTKDAS 276

Query: 218 DIGRTPSQV-----SPSFREMEAGFHR----QESGHLSFPYLGIEFDGYYKRVNLTDDMY 268
            +G   S +       +  +++AG  R    +E GH+    L + F+     +  TD   
Sbjct: 277 KLGEKSSDLLDTNEQANLAQLKAGEVRYDIDREHGHIE---LFLPFN-----IGQTDAR- 327

Query: 269 WTLM-------VFVDKATALADVDVA----VANAITTGIVLIGISVGVIIFIINQIYKPL 317
           WTLM       V  D  T  +D+D      +      G+++ GI + VI  + + I +PL
Sbjct: 328 WTLMMQLPLNAVMADLHTLQSDLDAQRKADIVGMAIAGLLIAGIGLLVIWLVGHGIARPL 387

Query: 318 LRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSS 377
            ++   + D+AQG GDLTRRL  +  D+L  I+ GFN F   LQ M+ Q+  + Q +S S
Sbjct: 388 KQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDS 447

Query: 378 IEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQS 437
            E  +  A    Q +     E DQV TA+ +M+ +A+ VA + TQ+ Q    A + A Q 
Sbjct: 448 SEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQG 507

Query: 438 LVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEA 497
           + IV +  +++ +L  ++      +  + +D+  I+ +L+ I  I+EQTNLLALNAAIEA
Sbjct: 508 MRIVRDTSTSIGALAEEIGKAVGVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEA 567

Query: 498 ARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTA 557
           ARAGEQGRGFAVVADEVR LA +TQ +T EI  M+ +L +GT  VV  ME ++ +   + 
Sbjct: 568 ARAGEQGRGFAVVADEVRNLAQKTQKATEEIQAMIQQLQQGTRDVVRVMEDSQSRTDESV 627

Query: 558 DKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGR 617
              ++ + +L  +S +VS I+D++TQIA+A E+QS VA +++RN+++I ++   +     
Sbjct: 628 QHAAKAAEALETISQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGAD 687

Query: 618 QTVGATESLSHSNHELEQLVGKFKL 642
           ++  A+  L+    +  +L+ +FK+
Sbjct: 688 ESSAASADLTKLAEQQRRLINQFKV 712