Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  218 bits (556), Expect = 4e-61
 Identities = 127/347 (36%), Positives = 201/347 (57%), Gaps = 1/347 (0%)

Query: 297 VLIGISVGVIIFIINQ-IYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNR 355
           + + + V +I+ +I++ I  P+     A  ++A+G GDLT RLE +G D+L Q++  FN 
Sbjct: 202 IAVWLPVILILGVISRSISAPMADTIAAFENIARGEGDLTLRLEESGRDELKQVAASFNE 261

Query: 356 FSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESART 415
           F   +Q ++  +S +        E L+  + +   +  +  +ET  V TAI +MS ++  
Sbjct: 262 FVAKIQALVNSVSASVTHSRELAEGLADISAQASMVTANMQAETQSVATAINEMSMASSE 321

Query: 416 VAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEV 475
           VA +   +     +A  EA  ++ +V+ AV+ +  L N++E  ++    +   + KI ++
Sbjct: 322 VASNAQLAADSAGSADGEADDTVAVVDGAVAKIKGLSNELEVTADEAQALQISSGKIGQI 381

Query: 476 LSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKL 535
           L VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQ ST EI+ ++  +
Sbjct: 382 LDVIVGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLASRTQESTQEINAIIEAI 441

Query: 536 LEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVA 595
               DSV  ++ R K Q + T  +TS+V  +L  + +S+  I D++ QIA ATE+QS V 
Sbjct: 442 RASVDSVNASVARAKAQSEQTVGETSQVVEALQTIKSSIRQISDMNIQIATATEEQSAVI 501

Query: 596 AELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
           AEL+ N+  I +I         +    +E +   + +LE L+  FKL
Sbjct: 502 AELNMNVTRINDISLENQQKSEEIGSTSEQIKSGSADLESLISTFKL 548