Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 662 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  203 bits (517), Expect = 2e-56
 Identities = 126/368 (34%), Positives = 211/368 (57%), Gaps = 8/368 (2%)

Query: 281 LADVDVAVANA---ITTGIVLIGISVGVII----FIINQIYKPLLRLKVAVLDLAQGSGD 333
           L D   A+ANA   + + IVL+ +S  V+I    FI   ++  L  L   V + +Q   D
Sbjct: 296 LTDTRSALANAKSLMVSVIVLMLVSGLVVILLSLFIGRYLHASLRHLYHKVTE-SQKHYD 354

Query: 334 LTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLI 393
           L+ R+++ G D++ Q+   FN    + + ++  +   TQ + ++ +++   A+   + + 
Sbjct: 355 LSVRVDLKGKDEIGQLGSAFNHMMADFEKVIGMVRTNTQGLLTASQEMEGCARIMREDVA 414

Query: 394 SHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVN 453
              SE DQV +A+T+MS + + +A++  Q+++ +  A+KEA++  + V     ++  L  
Sbjct: 415 LGHSEVDQVASAMTEMSATVQEIAQNAVQASEASAQANKEAKEGSLEVERTADSINELAQ 474

Query: 454 DVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADE 513
           ++ + +++I+N++ D   I +VL VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADE
Sbjct: 475 EIADAAQAINNLDEDIKGIVDVLGVISGIAEQTNLLALNAAIEAARAGEMGRGFAVVADE 534

Query: 514 VRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSAS 573
           VR+LA R Q ST +I  M  +L  G    V AME  + + + +  ++      L  + + 
Sbjct: 535 VRSLAQRAQTSTEDIRSMTERLERGAKIAVKAMESGRNKAEISVVESKRAGEELIRIVSE 594

Query: 574 VSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHEL 633
           VS ID ++ QIAAAT +QS V+ E+++N + I +I  +      +     ESL +    +
Sbjct: 595 VSVIDSMNEQIAAATHEQSAVSEEVNQNAMKISDIYRNTHEVSDRLSQLNESLLNDVSAM 654

Query: 634 EQLVGKFK 641
            +LV KFK
Sbjct: 655 SELVSKFK 662