Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  216 bits (551), Expect = 2e-60
 Identities = 129/363 (35%), Positives = 208/363 (57%), Gaps = 2/363 (0%)

Query: 280 ALADVDVAVANAITTGIVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLE 339
           A+ ++D A    +   ++ I ++V V I +I  +   L ++  A+  LA  SG+LT +L+
Sbjct: 314 AIDEIDSASYKTLALVLIAIVVAVLVSIAVIRPLKNSLDKVNNALNILA--SGNLTHKLD 371

Query: 340 VNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSET 399
            +G+D+ A++S   NR   +L+ ++  I D +  ++++ E+ S    +    +    ++ 
Sbjct: 372 DSGHDEFAELSRNCNRLVDSLRTLIQGILDRSNQLAAAAEETSAITAQTTAGIQEQKNQV 431

Query: 400 DQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMS 459
           DQV TA TQ+S SA  V+ S  ++      A +EAQ    I +    T+ +L ++V    
Sbjct: 432 DQVATATTQLSSSAMQVSTSADEALNQIRQADEEAQHMRAIADENKRTILALADEVAKAG 491

Query: 460 ESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAA 519
           + I+ ++ D+  I  +L VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+
Sbjct: 492 QVINKVHSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAS 551

Query: 520 RTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDD 579
           RTQ+ST EI  M+  L +GT   V  ME  +QQ  +  +KT + + +L  +S +V    D
Sbjct: 552 RTQDSTQEIQQMIQVLQQGTQEAVSVMELGRQQANSCVEKTEQANVALESISNAVHYAHD 611

Query: 580 LSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGK 639
             T IA A ++Q+ V+ ++S  +  I  I E       QT  ++  ++    EL+  VG+
Sbjct: 612 SGTHIANAAQEQNLVSQQVSEKLEHIAAISEETATGADQTAQSSHQVAQLAEELQASVGE 671

Query: 640 FKL 642
           FK+
Sbjct: 672 FKV 674