Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  279 bits (714), Expect = 2e-79
 Identities = 146/347 (42%), Positives = 234/347 (67%)

Query: 296 IVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNR 355
           +VL+ I+  V++    ++  P+  +   + D+A+G GDLT+RL+V G+D++A +   FN+
Sbjct: 208 LVLVAITAVVMLVAAQRMVNPIHNMVQNLEDIAKGEGDLTKRLDVQGSDEIAMLGRAFNQ 267

Query: 356 FSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESART 415
           F   LQ ++  ++ AT  + S  + +S       Q LISH++ETDQVVTAIT+MS +A  
Sbjct: 268 FVDKLQGIIKDVARATVEVKSGADNISSQTAAMAQQLISHNNETDQVVTAITEMSATASE 327

Query: 416 VAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEV 475
           VA S TQ  + T+AA+++   +   V++++  V++L+ +++  +  I+++N  + KI+ V
Sbjct: 328 VAMSTTQVAEATQAATQDVGNAQECVDSSLHEVSTLMAEIDMAAGHINSLNEQSQKINSV 387

Query: 476 LSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKL 535
           LSVIG I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ ST EI++ML++L
Sbjct: 388 LSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASTLEINEMLSEL 447

Query: 536 LEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVA 595
                  V +ME ++Q C  +   +  +S SL  ++++V+ I+D+STQIA A  +QS+V 
Sbjct: 448 HNLVSLAVSSMESSQQSCHRSVTSSRAISDSLGAVTSAVTSINDMSTQIATAATEQSSVT 507

Query: 596 AELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
            E++RN+ +I+EIV  L+ +       ++ L++    L+ LVG+FK+
Sbjct: 508 EEINRNVFAIQEIVNELLQASNSASDTSQGLANEGRNLDTLVGQFKV 554