Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  242 bits (617), Expect = 4e-68
 Identities = 130/351 (37%), Positives = 209/351 (59%)

Query: 292 ITTGIVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISE 351
           I  G +   I   +  FI   I +P+     A+ D+A+G GDLTRR+EV   D++AQ++ 
Sbjct: 284 IMIGFIAFLIGTAIAWFIAKSITRPIAETTNALNDIAEGEGDLTRRIEVKSKDEIAQLAL 343

Query: 352 GFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSE 411
            FNRF+  +   + Q+SD+T ++++S E++S    E +QM      ET+QV TA+ +M+ 
Sbjct: 344 AFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITNETQQMAKRQHLETEQVATAMNEMAA 403

Query: 412 SARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANK 471
           + + VA + T +      AS+  +   ++V   +ST++ L +++ + +++I+ + R+  +
Sbjct: 404 TVQEVAHNATDAADAATHASESTEHGKLLVEKVISTISLLADEIAHAAKAINELERNTAQ 463

Query: 472 ISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDM 531
           I  VL VI  I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA+RTQ ST+EI  M
Sbjct: 464 IDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTSEIQQM 523

Query: 532 LTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQ 591
           +  L     S V  M  +    Q       E   +L  ++ +VS I  ++ QIA+A  +Q
Sbjct: 524 IEALQHSAKSTVSTMNTSTATTQNCVSLVHEAGEALEAITQAVSTISQMNIQIASAANEQ 583

Query: 592 STVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
             V+AE+++N+ +I +I  +   S  QT  A + L+  +  L  L+ +F++
Sbjct: 584 CAVSAEINKNVNNINDITINATESAVQTARAGDELAQLSMRLTTLLAQFRI 634