Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  218 bits (554), Expect = 7e-61
 Identities = 128/378 (33%), Positives = 212/378 (56%), Gaps = 8/378 (2%)

Query: 269 WTLMVFVDKATALADVDVAVANAITTGIVLIG-ISVGVIIFII---NQIYKPLLRLKVAV 324
           WTL+        L+DV  ++   +   ++++  ISV +  F +   + I  PL     A+
Sbjct: 172 WTLIT----GAYLSDVKESLYEVMVDYLIIMFLISVPIFAFFLVLNHSITSPLNDAIEAL 227

Query: 325 LDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQT 384
            D+AQG GDL++RL   G D++A ++  FN F+  + +M+  +    Q + +  + L   
Sbjct: 228 EDIAQGEGDLSQRLSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKLLMLA 287

Query: 385 AKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNA 444
            +E+ Q       ET  V TA+ QM  +   +A +  Q+     +   +AQQS  +++N 
Sbjct: 288 VEESNQSAEHIHRETGSVATAVNQMLSTTHEMASNTQQAADAATSVKSQAQQSKGVIDNT 347

Query: 445 VSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQG 504
           V     LV +++        + + + +I  +L VI AI+EQTNLLALNAAIEAARAG  G
Sbjct: 348 VRDTEKLVQELKASEAITQKLGQASGQIGSILDVIRAIAEQTNLLALNAAIEAARAGSHG 407

Query: 505 RGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVS 564
           RGFAVVADEVRALA RTQ+ST EI  +++++  G  SV+ +  +T++Q +    K  E  
Sbjct: 408 RGFAVVADEVRALANRTQDSTNEIQKIISEIQTGVGSVMQSNSQTQRQSEELQAKAQEAG 467

Query: 565 GSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATE 624
            ++  +   ++ I D++TQ+A+ATE+QS V  E++RN+ +I E+ E  V +      A +
Sbjct: 468 QAMAAILELIAHISDMNTQLASATEEQSLVTEEINRNICNISELTEVSVKANESNSRAAQ 527

Query: 625 SLSHSNHELEQLVGKFKL 642
           SL   + ++   +G+FK+
Sbjct: 528 SLQDISQDMSHTLGQFKI 545