Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  270 bits (690), Expect = 1e-76
 Identities = 143/347 (41%), Positives = 228/347 (65%)

Query: 296 IVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNR 355
           +VL G +  VI+   +++  P+  +   + D+A+G GDLT+RL V G D++AQ+   FN 
Sbjct: 208 LVLTGATAFVIMVAAHRMVVPIKNMADNLNDIAKGEGDLTKRLSVKGEDEIAQLGRAFNL 267

Query: 356 FSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESART 415
           F   LQ+++  ++ AT  + ++   +    K     L+SH++ETDQVVTAIT+MS +A  
Sbjct: 268 FVDKLQHIIGDVASATAKVKTAANAIHDQTKVMSSQLLSHNNETDQVVTAITEMSSTASE 327

Query: 416 VAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEV 475
           VA++ TQ  + T+AA+ +   +   V+ ++  + +L+  + + + SI +++  + KI+ V
Sbjct: 328 VAQNTTQVAEATQAATGDVANAQRCVDASLEEIAALMEQINHAAGSIKSLSEQSQKINSV 387

Query: 476 LSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKL 535
           LSVIG I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ ST EI++ML+ L
Sbjct: 388 LSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASTLEINEMLSAL 447

Query: 536 LEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVA 595
            +     V  M+ ++Q C  + + +  +S SL  ++++V+ I+D+STQIA A  +QS+V 
Sbjct: 448 HKLVSQAVKTMDESQQSCVRSVESSRAISESLGSVTSAVTAINDMSTQIATAATEQSSVT 507

Query: 596 AELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
            E++RN+ +I+EIV  L+ S       ++++S     L  LVG+FK+
Sbjct: 508 EEINRNVYAIQEIVNELLHSSEHAARVSQTVSQEGTNLGNLVGQFKI 554