Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  275 bits (702), Expect = 5e-78
 Identities = 156/399 (39%), Positives = 245/399 (61%), Gaps = 8/399 (2%)

Query: 252 IEFDGYYKRVNLTDDMYWTLMVFVDKATALADVDVAVANA--------ITTGIVLIGISV 303
           IE  GY   +  TD M  T     D    + D    V           +   ++L  I+ 
Sbjct: 156 IEKIGYSMMIPGTDWMLGTGAYIDDIDAVVEDYRTTVTEQMIDKSYAILLIALLLAAITA 215

Query: 304 GVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNM 363
            VI+    ++  P+  +   + D+A+G GDLT+RL V G+D++AQ+   FN F   LQ +
Sbjct: 216 PVILVTAQRMVTPIKNMADNLNDIAKGEGDLTKRLAVKGDDEIAQLGRSFNLFVDKLQTI 275

Query: 364 MLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQS 423
           +  ++ AT  + ++   +    K   + LISH++ETDQVVTAIT+MS +A  VA++ TQ 
Sbjct: 276 IGDVAHATAKVKTAANAIHDQTKVMSRQLISHNNETDQVVTAITEMSATASEVAQNTTQV 335

Query: 424 NQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAIS 483
            + T AA+ +   +   V+ ++  +++L+  + N + +I +++  + KI+ VLSVIG I+
Sbjct: 336 AEATHAATGDVANAQRCVDASLEEISALMAQINNAASNIQSLSEQSQKINSVLSVIGGIA 395

Query: 484 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVV 543
           EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA+RTQ+ST EI++ML++L +     V
Sbjct: 396 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQSSTLEINEMLSELHKLVSLAV 455

Query: 544 GAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNML 603
             ME ++Q C  + D +  +S SL  ++++V+ I+D+STQIA A  +QS+V  E++RN+ 
Sbjct: 456 KTMEESQQSCIRSVDSSRAISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVF 515

Query: 604 SIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
           +I+EIV  L+ S  +    ++++S     L +LVG+FK+
Sbjct: 516 AIQEIVNELLHSSEEAASVSQTVSQEGLNLGKLVGQFKI 554