Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  277 bits (708), Expect = 1e-78
 Identities = 146/347 (42%), Positives = 232/347 (66%)

Query: 296 IVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNR 355
           +VL GI+  +I+   +++  P+  +  ++ D+A+G GDLT+RL V G D++AQ+ + FN 
Sbjct: 208 LVLTGITAFIIMVAAHRMVVPIKNMADSLNDIAKGEGDLTKRLSVKGEDEIAQLGQAFNL 267

Query: 356 FSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESART 415
           F   LQ ++  +++AT  + S+   +    K     L+SH++ETDQVVTAIT+MS +A  
Sbjct: 268 FVDKLQTIIGDVANATAKVKSAANAIHDQTKVMSSQLLSHNNETDQVVTAITEMSSTASE 327

Query: 416 VAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEV 475
           VA++ TQ  + T+AA+ +   +   V+ ++  +  L++ + N + SI +++  + KI+ V
Sbjct: 328 VAQNTTQVAEATQAATGDVANAQRCVDASLEEIAGLMSQINNAAGSIKSLSEQSQKINSV 387

Query: 476 LSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKL 535
           LSVIG I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA+RTQ ST EI++ML++L
Sbjct: 388 LSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQASTLEINEMLSEL 447

Query: 536 LEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVA 595
            +     V  M+ ++Q C  + D +  +S SL  ++++V+ I+D+STQIA A  +QS+V 
Sbjct: 448 HKLVSVAVKTMDESQQSCVRSVDSSRAISESLGSVTSAVTAINDMSTQIATAATEQSSVT 507

Query: 596 AELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
            E++RN+ +I+EIV  L+ S       ++++S     L +LVG+FK+
Sbjct: 508 EEINRNVYAIQEIVNELLHSSEDAAKVSQTVSQEGINLGKLVGQFKI 554