Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  216 bits (550), Expect = 2e-60
 Identities = 130/378 (34%), Positives = 210/378 (55%), Gaps = 8/378 (2%)

Query: 269 WTLMVFVDKATALADVDVAV-ANAITTGIVLIGISVGVIIFII---NQIYKPLLRLKVAV 324
           WTL+        L+DV  ++ A  I   I++  ISV +  F +   + I  PL     A+
Sbjct: 172 WTLIT----GAYLSDVKQSLKAVIIDYLIIMFLISVPIFAFFLVLNHSITSPLNDAIDAL 227

Query: 325 LDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQT 384
            D+AQG GDL++RL   G D++A ++  FN F+  + +M+  +    Q + +  +QL   
Sbjct: 228 EDIAQGEGDLSQRLSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKQLMLA 287

Query: 385 AKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNA 444
            +E+ Q       ET  V TA+ QM  +   +A +  Q+     +   +AQQS  ++++ 
Sbjct: 288 VEESNQSAEHIHRETGSVATAVNQMLSTTHEMASNTQQAADAANSVKNQAQQSQAVIDDT 347

Query: 445 VSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQG 504
           V     LV ++         + + + +I  +L VI +I+EQTNLLALNAAIEAARAG  G
Sbjct: 348 VRDTEKLVQELRASEVITQKLGQSSAQIGSILDVIRSIAEQTNLLALNAAIEAARAGSHG 407

Query: 505 RGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVS 564
           RGFAVVADEVRALA RTQ+ST EI  +++ +  G +SV+ +  +T+ Q      K  E  
Sbjct: 408 RGFAVVADEVRALANRTQDSTNEIQKIISDIQMGVNSVMKSNSQTQTQSDELQAKAREAG 467

Query: 565 GSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATE 624
            ++  +   ++ I D++TQ+A+ATE+QS V  E++RN+ +I E+ E  V +      A +
Sbjct: 468 NAMAAILQLIAHISDMNTQLASATEEQSLVTEEINRNICNISELTEVSVKANEGNSRAAQ 527

Query: 625 SLSHSNHELEQLVGKFKL 642
           SL   + ++   +G+FK+
Sbjct: 528 SLQDISQDMSHTLGQFKI 545