Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  213 bits (542), Expect = 2e-59
 Identities = 131/367 (35%), Positives = 209/367 (56%), Gaps = 5/367 (1%)

Query: 280 ALADVDVAVANAITTGI---VLIGISVGVIIF-IINQIYKPLLRLKVAVLDLAQGSGDLT 335
           AL  +D   ++++  GI   V+I + + VI + II  I  P+ R+   V+   + S DLT
Sbjct: 255 ALKAIDDTESSSVNIGILVFVIIALILAVITYLIIRSIITPVERI-TQVISRIEVSKDLT 313

Query: 336 RRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISH 395
            R + +  D+L +I++ FN   G+ Q ++ Q+ D+   I++S + +S+ A    + +   
Sbjct: 314 LRCDASTQDELGEIAQHFNSMVGSFQQLIEQVIDSVATINTSCKSVSENAMLASEGVAQQ 373

Query: 396 SSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDV 455
            +ETD V TAIT+M  +   +A++   +          AQ     V   +  +  L   +
Sbjct: 374 LNETDMVATAITEMGATIDEIAKTTELAALKAGKTHDNAQLGQTEVEQTILKIRQLSEQI 433

Query: 456 ENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 515
            + +  +  + RD+  I  VL VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR
Sbjct: 434 NSSASVVDELERDSETIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 493

Query: 516 ALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVS 575
           +LA RTQ ST EI++++  L   T ++V  M+ +++Q   +A++ +     L +++  V 
Sbjct: 494 SLAMRTQTSTQEIANIIQTLQSRTRAIVQLMDASQKQGAESAEQAAAAGELLKLINTDVH 553

Query: 576 DIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQ 635
           +I D+STQIAAA E+QS VAAE+++N++ IR+I E    +      A++ L      L  
Sbjct: 554 NIMDMSTQIAAAIEEQSMVAAEVNKNVVVIRDIAEDSSRAADANASASDELKSRAEYLVS 613

Query: 636 LVGKFKL 642
            V  FK+
Sbjct: 614 AVSHFKI 620