Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  126 bits (317), Expect = 9e-34
 Identities = 86/315 (27%), Positives = 159/315 (50%), Gaps = 9/315 (2%)

Query: 26  PVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWGRRPTMLVGLLIYGSATF 85
           P +  I+ +  VS A A+QTLSV+   F LG +++G L+D+ GRRP +L GL+++  A  
Sbjct: 4   PAIADISHALGVSLAFASQTLSVFIFGFVLGPLLFGPLSDRIGRRPILLAGLVVFTIAGI 63

Query: 86  IAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELRKVFSLMGIGISISPVLG 145
                    +L+ AR          + +   I+RD F G + RK+ S + +  +++P++ 
Sbjct: 64  ACTFAQDINLLLSARFLQGCAAGAAATLPIAIVRDQFEGVQARKLQSHLALVNNLAPLIA 123

Query: 146 MLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQVKPKIALGCLVA---RMFKD 202
            LLG  +   G  + ++ AL    ++L++       ET   K   A   L+     + K 
Sbjct: 124 PLLGSAILVVGNWRWIYAALAVCGVILWLRAQTSFDETATRKSSNAAASLLTSYLSVLKS 183

Query: 203 RQVLLSALLVALYNVALFSYYQLGAFIF-SDLGLDAEQFGYSGIALGLGSLIGSFLNKTL 261
           R+ L+S L++A     +F+Y      +F ++LG+ +  F        +G++ GS++N  L
Sbjct: 184 RRFLVSTLIMAFNFAGMFAYIAASPLVFMNNLGMTSAGFAVLFALTAMGTIAGSWVNGRL 243

Query: 262 LAKQVPQRALL---LLAALLLIMGTIGVS-LTLDSIGFVAAMILVV-IAYGMAIPNILST 316
           +     +  +L   LLA+LL+ +G +  S L +  I  + A++++  +  G+ +PN   +
Sbjct: 244 IHAGFAEHRVLGGALLASLLISLGLVVESQLAIYPIYILTALVVMSNLCTGIVMPNATHS 303

Query: 317 ALVEYKSQAGSAGAL 331
           AL +    AG+  AL
Sbjct: 304 ALEDLSITAGAGAAL 318