Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  115 bits (288), Expect = 2e-30
 Identities = 96/371 (25%), Positives = 171/371 (46%), Gaps = 20/371 (5%)

Query: 16  FPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWGRRPTMLV 75
           F  +    Y P   ++A +F   +     TL+ YFL  ++G + +G +AD++GRR  +L 
Sbjct: 15  FGPLAIDFYLPAFPAMATAFGTDEKHIQLTLAAYFLGLSIGQLAYGPVADRFGRRIPLLT 74

Query: 76  GLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELRKVFSLMG 135
           G+ ++  A+       S   L+ AR   A G   G V+++ ++ D        KVFS + 
Sbjct: 75  GVGLFTLASLACAYAPSLEWLIGARFVQALGGCAGMVISRAVVSDKCDAVGSAKVFSQLM 134

Query: 136 IGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPET--QQVKPKIALG 193
           + + ++P+L  +LGG L    G Q +F+AL   + +        LPE+    V  +   G
Sbjct: 135 LVMGLAPILAPMLGGLLVNLHGWQSIFIALTLFSALASTAVALWLPESLPDYVPRQPLSG 194

Query: 194 CL--VARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDL-GLDAEQFGYSGIALGLG 250
            L    R+  D   L  AL   +    +F+Y     F+F  L G+ AE FG+       G
Sbjct: 195 ALRQYGRLLTDAVFLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVPAEHFGWLFGTNAAG 254

Query: 251 SLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLDSI-------GFVAAMILVV 303
            ++ + +N  LL+K+ P  A LL  A+ + +G  G+SL   S          +  + + +
Sbjct: 255 FILVAQVNARLLSKRGP--AFLLSRAVWVYLGA-GLSLLAVSSLQPAQLWPLLVPLFICI 311

Query: 304 IAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALT-----GLVQRLGVVLL 358
            + G  +PN  + A+    ++AGSA A+ G L + +     +L      G    + +V+ 
Sbjct: 312 ASLGCILPNASACAMNGQGARAGSASAMLGCLQFSVAAGAASLVAALHDGTAVPMALVIS 371

Query: 359 MCAGITLLATL 369
           +C  + + A +
Sbjct: 372 LCGLLVVGAAM 382