Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  114 bits (285), Expect = 5e-30
 Identities = 101/366 (27%), Positives = 167/366 (45%), Gaps = 21/366 (5%)

Query: 23  IYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWGRRPTMLVGLLIYGS 82
           I  P    I +   V+  +   TLS +F+ FALG ++ G LAD++GR+  +L GL ++  
Sbjct: 42  IILPAFAEIGKDLGVTARELGLTLSSFFITFALGQLVVGPLADRYGRQKLVLGGLSVFVV 101

Query: 83  ATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELRKVFSLMGIGISISP 142
            T IA    +  +L+  RV  A G+   SV+++ I RD+F G  L +  SL  I  + +P
Sbjct: 102 GTVIAGLATTLDVLIAGRVVQALGVCAASVLSRAIARDLFEGETLARALSLTMIATAAAP 161

Query: 143 VLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQV---KPKIALGCLVA-- 197
               L G  L+   G + +F+ +   A+VL  + +  L ET       P  A   ++A  
Sbjct: 162 GFSPLAGSVLSVTLGWRAIFILVGLAAVVLAFFYVRDLGETHPADRRAPHSAKSVVLAYG 221

Query: 198 RMFKDRQVLLSALLVALYNVALF-SYYQLGAFIFSDLGLDAEQFGYSGIALGLGSLIGSF 256
           R+  D++ +L AL ++L    LF S+    A +   +GL + Q G    A          
Sbjct: 222 RLALDKRFILPALSMSLLMSGLFASFAAAPAILMQGIGLTSLQTGLYFAATVFVVFAAGM 281

Query: 257 LNKTLLAKQVPQRALLL-LAALLLIMGTIGVSLTLDSIGFVAAMILVVIAYGMAIPNILS 315
               L  +   + A L+ +A  +   G + V      +G+  A+ ++   +GM + N L 
Sbjct: 282 AAPRLAHRHGARIATLVGIACAMAGGGLLLVGPAAPGLGWY-ALSMITFLWGMGLANPLG 340

Query: 316 TALV--EYKSQAGSAGALFGLLYYLLIGSGLALTGL--------VQRLGVVLLMCAGITL 365
           TA+    +  +AG A AL G   +L +G+    T L        V  LG +  M   + L
Sbjct: 341 TAITMGPFGKEAGMASALLG---FLSMGAAALSTWLASVLSFAPVTTLGGIQTMACLVAL 397

Query: 366 LATLAR 371
           +  L R
Sbjct: 398 VLFLLR 403