Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., drug resistance transporter, Bcr/CflA family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  122 bits (307), Expect = 1e-32
 Identities = 98/375 (26%), Positives = 180/375 (48%), Gaps = 27/375 (7%)

Query: 9   LMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWG 68
           LM ++L+ P  ++ IY P + ++A  FSV + Q   TL ++  A  +G V+ G LAD++G
Sbjct: 9   LMSLVLLSPLAID-IYLPSMPAMALDFSVDERQVQSTLVLFLFAMGVGQVLIGPLADRYG 67

Query: 69  RRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELR 128
           RRP  L G ++Y  ++ +AM    F +L LAR+         S+V  + +RD +S  +  
Sbjct: 68  RRPVALFGTVLYVISSLLAMAALEFELLQLARLLQGLAACSTSIVAFSAVRDSYSSADSA 127

Query: 129 KVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQVKP 188
           +++S +   I + P L   LGG LA   G +  F  + F  LV+ +    +LPET+    
Sbjct: 128 RIYSYLNGAICVIPALAPTLGGLLAIQFGWRSTFAFMAFYGLVMLLVVGYRLPETRPAHT 187

Query: 189 KIALGCL-----VARMFKDRQVLLSALLVALYNVALFSYYQLGA-FIFSDLGLDAEQFGY 242
           + A G L      A + K+   +  A+       A+  Y    + ++   LG+   +  +
Sbjct: 188 ESA-GPLYRWGRYAPVLKNSHFMFYAVTCMAAMAAILCYVSYSSIWLIGKLGV--SELAF 244

Query: 243 SGIALGLGSLIG--SFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLD--------- 291
           SG+  GL +++   +     ++ +++  R  +L+A  L+I+ ++ + L L          
Sbjct: 245 SGL-FGLNAVVNVVACFAAPVVIRKLGNRPTVLVALGLMILASV-LELVLQLPAWASPMA 302

Query: 292 -SIGFVAAMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLV 350
            S  F+  M+L+ + +   +    S AL  +  +AG+A AL G   ++ +     +T LV
Sbjct: 303 ASFAFMLPMMLLCVGFAFLLGPATSMALAPFGERAGTATALLG---FIQMSGASVITALV 359

Query: 351 QRLGVVLLMCAGITL 365
           Q   +      G T+
Sbjct: 360 QLTPMTAPYAIGYTM 374