Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., Drug resistance transporter Bcr/CflA subfamily (NCBI) from Rhodospirillum rubrum S1H

 Score =  114 bits (285), Expect = 5e-30
 Identities = 89/336 (26%), Positives = 161/336 (47%), Gaps = 12/336 (3%)

Query: 9   LMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQ-TLSVYFLAFALGVVIWGVLADKW 67
           LM +++    +   +    L  I+  + ++DA   Q  ++ Y L FA+G  +WG L+D+ 
Sbjct: 22  LMAMLMALTALSIDVMLVALADISSDYFLADANDRQLVITAYLLGFAVGQPVWGPLSDRI 81

Query: 68  GRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHEL 127
           GR+P ++ GL+IYG     AM + SF  L+ AR+    G A   V+T  ++RD ++G  +
Sbjct: 82  GRKPVLIAGLVIYGLGCLGAMVSPSFETLLAARLVQGLGGASPRVMTMAVVRDRYAGSGM 141

Query: 128 RKVFSLMGIGISISPVLGMLLGGQ-LAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQV 186
            +V SL+ +   I P+L   +G   +AFA  H L    + F  L++ V+ L +L ET + 
Sbjct: 142 ARVMSLLMMIFIIVPILAPTMGSAVMAFAPWHWLFGFMMVF-DLIVLVWTLTRLRETHRP 200

Query: 187 KPKIA--LGCLVARM---FKDRQVLLSALLVALYNVALFSYYQLGAFIFSDLGLDAE--- 238
           + ++A  LG L+  +     +RQ +   +       +L  Y      +F ++  + E   
Sbjct: 201 QRQLAPSLGGLLETLRVVVSNRQTVGYTVAFGFMMGSLMGYVGTAQQVFVEVYHEVELFP 260

Query: 239 -QFGYSGIALGLGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLDSIGFVA 297
             FG    A+   S+I +     + ++++   ALL   A+ L+    G         F+A
Sbjct: 261 ILFGAIASAIAAASIINARFVTRIGSRRMSHAALLGFVAVGLVTAAFGFPAKPPLALFMA 320

Query: 298 AMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFG 333
           A+ +    +G+  PN  + A+      AG+A +  G
Sbjct: 321 ALGIQFFCFGLIGPNFNAMAMEPMGRVAGAASSFVG 356