Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., multidrug effflux MFS transporter from Pseudomonas sp. BP01

 Score =  129 bits (323), Expect = 2e-34
 Identities = 103/379 (27%), Positives = 175/379 (46%), Gaps = 16/379 (4%)

Query: 16  FPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWGRRPTMLV 75
           F  +    Y P   ++A++F+  +     TL+ YFL  ++G + +G +AD++GRR  ++ 
Sbjct: 15  FGPLAIDFYLPAFPAMAQAFATDEKHIQATLAAYFLGLSIGQLAYGPVADRFGRRIPLMF 74

Query: 76  GLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELRKVFSLMG 135
           G+ ++  A+       +   L+LAR   A G   G V+++ I+ D        KVFS + 
Sbjct: 75  GVTLFTLASLACAYAPNLDTLVLARFVQALGGCAGMVLSRAIVSDKCDPVSSAKVFSQLM 134

Query: 136 IGISISPVLGMLLGGQLAFAGGHQLVFLAL-FFIALVLFVYNLC---QLPETQQVKPKIA 191
           + + ++P+L  +LGG L    G Q +FLAL  F A  L   +L     LPE    +P   
Sbjct: 135 LVMGLAPILAPMLGGVLVNLAGWQSIFLALSLFSAGCLLAVSLGLPESLPEHMPRQPLSG 194

Query: 192 LGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDL-GLDAEQFGYSGIALGLG 250
                 R+  DR  L  AL   +    +F+Y     F+F  L  + AE +G+       G
Sbjct: 195 ALRQYLRLLADRVFLGHALTGGIAIAGMFAYIAGSPFVFIKLYDVPAEHYGWLFGTNAAG 254

Query: 251 SLIGSFLNKTLLAKQVPQRAL-----LLLAALLLIMGTIGVSLTLDSIGFVAAMILVVIA 305
            ++ + +N  LLAK+ P   L     + LAA L ++G   +         +  + + + +
Sbjct: 255 FILVAQVNARLLAKRGPAFLLARGVWVYLAAGLALLGVAALQ-PAQLWPLLVPLFICIAS 313

Query: 306 YGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQ-----RLGVVLLMC 360
            G  IPN  + A+    ++AGSA AL G L + +     AL GL+       + +V+ +C
Sbjct: 314 LGCIIPNASACAMSGQGARAGSASALMGCLQFSVAAGAAALVGLLHDGSAVPMAMVISLC 373

Query: 361 AGITLLATLARSSHIARLP 379
             + +   L      AR P
Sbjct: 374 GALAVSVALLTRRLQARRP 392