Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bcr/CflA family multidrug efflux MFS transporter from Pseudomonas aeruginosa PA14

 Score =  133 bits (334), Expect = 1e-35
 Identities = 107/377 (28%), Positives = 190/377 (50%), Gaps = 18/377 (4%)

Query: 7   LWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADK 66
           L L+  ++ F  +   +Y P L +IA     SDAQ  +++S + + F +G++ +G L+D+
Sbjct: 18  LLLLSALVAFGPLSIDMYLPSLPAIAADLGASDAQVQRSISGFLVGFCVGMLFYGPLSDR 77

Query: 67  WGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHE 126
           +GRRP +L G+ +Y  ++      DS   L+L RV  A G    SV+ + ++RD++   E
Sbjct: 78  FGRRPVLLAGIALYLFSSLACALADSAGQLVLLRVLQALGGGAASVLARAMVRDLYPLGE 137

Query: 127 LRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVF--LALFFIALVLFVYNLCQLPETQ 184
             ++ +LM +   ++P+   LLGG L    G + +F  LALF    +L V+ + +    +
Sbjct: 138 AARMLALMHMVTMLAPLAAPLLGGYLMLWAGWRALFVVLALFAGLCLLAVWRVAESHPPE 197

Query: 185 QVKPKIALGCLV-ARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSD-LGLDAEQFGY 242
           +    +A   L   R+  DR+ L   L + L    +F+Y     F+F +  G+ AE+FG+
Sbjct: 198 RRGGSLAQAFLAYGRLLGDRRALGYVLCMGLAFAGMFAYISAAPFVFIEHFGVRAERFGW 257

Query: 243 SGIALGLGSLIGSFLNKTLLAKQVPQ---RALLLLAAL--LLIMGTIGVSLTLDSIGFVA 297
                 LG ++ ++ +  L+ +  P+   RA  LLA L  L ++G   +         V 
Sbjct: 258 FFGLNILGVMLATWCSARLVRRHGPRPLLRAGSLLACLSGLFLLGYAALGERGGLWALVP 317

Query: 298 AMILVVIAYGMAIPNILSTALVEYKSQAGSAGAL-------FGLLYYLLIGSGLALTGLV 350
            ++  V   G+   N +++ L  Y  QAG+A A+        G L  L +G  LAL G++
Sbjct: 318 GLLCFVSVTGLLGANCIASLLALYPGQAGAASAVAVSGQFGLGCLASLAVG-WLALPGVL 376

Query: 351 QRLGVVLLMCAGITLLA 367
             + +V+ +C   +LLA
Sbjct: 377 P-MALVMAVCGVGSLLA 392