Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (287), Expect = 3e-30
 Identities = 102/384 (26%), Positives = 184/384 (47%), Gaps = 30/384 (7%)

Query: 9   LMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWG 68
           LM+++++ P  ++ IY P +  +A  F+VS +Q   TL ++  A  +G V+ G LAD++G
Sbjct: 9   LMLMVVLSPLAID-IYLPSMPVMAAEFAVSASQVQSTLVLFLFAMGVGQVLIGPLADRYG 67

Query: 69  RRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELR 128
           RRP  L GLL+Y +++ +A     F  L LARV         S+V  + +RD F+  E  
Sbjct: 68  RRPIALGGLLLYIASSLLAAVAMEFQWLQLARVLQGLAACSTSIVVFSAVRDCFTPKEGA 127

Query: 129 KVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQVKP 188
           + +S +   I + P L   LGG LA   G +  F+ +   A+++ +    +LPET+    
Sbjct: 128 RYYSYLNGVICVIPALAPTLGGLLALQFGWRSTFVFMTLYAIIIMIIVGYRLPETRPAN- 186

Query: 189 KIALGCL-----VARMFKDRQVLLSALLVALYNVALFSYYQLG-AFIFSDLGLDAEQFGY 242
            +  G L        +  D   +  A        A+ +Y      ++   +G+   +  +
Sbjct: 187 TVTEGPLYRWSRYKPVLMDPHFMFYAFACMAGMAAILAYVSYSPVWLIETIGV--SELTF 244

Query: 243 SGIALGLGSL--IGSFLNKTLLAKQVPQR--------ALLLLAALLLIMGTIGVSLTL-D 291
           SG+  GL +L  IG+     ++ +++  R        A+L+ A L L +   G    L  
Sbjct: 245 SGL-FGLNALVNIGACFAAPVVIQKLGNRPTVIVALSAMLVSALLQLAVQWAGPQTGLAA 303

Query: 292 SIGFVAAMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQ 351
           + GF+  M+L+ I + + +    S AL  +  +AG+A A+ G   ++ +     L GLVQ
Sbjct: 304 AFGFMLPMMLLCIGFALLLGPATSMALAGFGERAGTATAMLG---FIQMSGASILAGLVQ 360

Query: 352 RLGV-----VLLMCAGITLLATLA 370
           +  +     V+++  G+  L  +A
Sbjct: 361 QTSLTAPYAVVVVMGGLASLLLVA 384