Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella loihica PV-4

 Score =  372 bits (956), Expect = e-108
 Identities = 204/368 (55%), Positives = 258/368 (70%), Gaps = 1/368 (0%)

Query: 1   MKTKPSLWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIW 60
           MKT PS+ LMVI++MFPQIVET+YSP L  IA  F V  A A QTLS+YFLAFA GVV W
Sbjct: 1   MKTTPSIPLMVILMMFPQIVETLYSPALPHIAAGFDVPLALAGQTLSIYFLAFAFGVVCW 60

Query: 61  GVLADKWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRD 120
           G+L D  GRR TML+GL +YG A F A+   SF  L+  R  SAFG AVGSVVTQT+LRD
Sbjct: 61  GILCDHLGRRRTMLLGLGLYGIAAFAALWAPSFQWLLAMRALSAFGAAVGSVVTQTMLRD 120

Query: 121 VFSGHELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQL 180
            F G  L KVF+ MG+GI+ISPV+GML GG L   GG+  VF  L  +A++L+   L +L
Sbjct: 121 SFDGTALAKVFAYMGMGIAISPVVGMLSGGLLTSLGGYPAVFFTLSLMAVLLYAVCLLRL 180

Query: 181 PETQQVKPK-IALGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDLGLDAEQ 239
           PET+    + + L  L  R+  D  +  +ALLVA +NV LFSYY  G F+F  LGL  + 
Sbjct: 181 PETRPATMQPLPLWALAKRLATDGNIWHNALLVAGFNVLLFSYYLQGPFVFQRLGLSTQA 240

Query: 240 FGYSGIALGLGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLDSIGFVAAM 299
           FGYSGIAL +G+L+GS +NKTLL +   Q  LL LA+LL ++G +GV L+   +GF+  M
Sbjct: 241 FGYSGIALAIGTLVGSAINKTLLQRGASQPRLLRLASLLALVGAVGVYLSETHLGFLLPM 300

Query: 300 ILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQRLGVVLLM 359
           +L+V A+G+AIPNILS ALVEY+ QAG+AGALFGLLYYLLI  GLA+  L ++LG  LL+
Sbjct: 301 VLIVAAFGIAIPNILSQALVEYRDQAGAAGALFGLLYYLLIALGLAMVSLAEQLGGPLLI 360

Query: 360 CAGITLLA 367
            + +  LA
Sbjct: 361 TSLLLSLA 368