Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (250), Expect = 6e-26
 Identities = 93/378 (24%), Positives = 176/378 (46%), Gaps = 25/378 (6%)

Query: 5   PSLWLMVIMLM----FPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIW 60
           P+L L++ ML        +   +Y P + ++A SF+ S     Q+LS+Y   +ALG++ +
Sbjct: 18  PNLALLIPMLSAIVAITPLAIDMYLPAMSTLASSFNSSVTTVQQSLSLYLAGYALGMLTF 77

Query: 61  GVLADKWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRD 120
           G +AD+ GRRP +L+GL  +G  +       S  + +  R   AF  A  +VV    +++
Sbjct: 78  GPIADRIGRRPLVLLGLTGFGLISLALAFVTSVEVFLGLRFLQAFIGAAATVVVPGYIKE 137

Query: 121 VFSGHELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVF--LALFFIALVLFVYNLC 178
           V+ G    K  S + + + ++P++   +G  +   G   L+F  LA +   L++ V    
Sbjct: 138 VY-GKNTAKGMSYVSLIMMLAPLIAPTMGSLILELGEWHLIFFILACYASLLLVLVLTKL 196

Query: 179 QLPETQQV--KPKIALGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDL-GL 235
           ++P   Q   + + +     A +F    V L      + + A F Y     F++ ++ GL
Sbjct: 197 RMPSDAQTSGRSQRSFFGAYAVVFTKPGVKLHIASGVMTSFAFFCYLTASPFVYMEVFGL 256

Query: 236 DAEQFGYSGIALGLGSL-IGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLDSIG 294
           D   F     +  +G+L + + +N  ++ K   +R L +   L  + G   +S+ L  + 
Sbjct: 257 DKSLFAIL-FSTNVGALMLANVINSRIVVKYGSRRMLKVATLLAAVAGIGLLSVNLFGLS 315

Query: 295 F---VAAMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYY----------LLIG 341
           +   VAA+I  +   G+   N  +  L++++ + G+A A+ G L +           L  
Sbjct: 316 YHFTVAALIPFMGFLGVMSVNADAIVLMKFQQETGTATAVIGTLRFGFGALAGPLLALFY 375

Query: 342 SGLALTGLVQRLGVVLLM 359
           +G A+      LG VLL+
Sbjct: 376 TGTAVPFSALMLGAVLLV 393