Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., drug resistance transporter, Bcr/CflA subfamily from Marinobacter adhaerens HP15

 Score =  141 bits (356), Expect = 3e-38
 Identities = 104/388 (26%), Positives = 183/388 (47%), Gaps = 14/388 (3%)

Query: 1   MKTKPSLWLMVIM---LMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGV 57
           M T  S+W  +++   +    +   +Y P L  I   F     Q   TLS+Y + FA+  
Sbjct: 1   MLTLTSVWTTILLAAAVALGPLATDMYLPALPQIGSDFGTGTDQVQLTLSLYMVGFAIAQ 60

Query: 58  VIWGVLADKWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTI 117
           +I G LAD++GR+P M+ G +++  A+       +   L+L R   A G + G V+ +  
Sbjct: 61  LICGPLADRFGRKPIMIGGFVLFAIASIGCALATNIETLILCRFLQALGGSAGPVLGRAA 120

Query: 118 LRDVFSGHELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNL 177
           +RD+++  E  K+ +++   ++++P +   +GG L    G   VF+AL   ALV+ V   
Sbjct: 121 IRDIYTPREAAKILAILASIMALAPAVAPTIGGLLTANLGWSSVFIALGGYALVMAVVVA 180

Query: 178 CQLPETQQVKPKIALG-CLVARMF----KDRQVLLSALLVALYNVALFSYYQLGAFIFSD 232
             +PE  + + + +L  C + R +    KD   +   L  AL    LF++    +F+  D
Sbjct: 181 FGIPEPMRPEHRQSLKICSLLRNYRTIAKDISFVGYTLTNALIFSGLFAFLSGSSFVLID 240

Query: 233 -LGLDAEQFGYSGIALGLGSLIGSF----LNKTLLAKQVPQRALLLLAALLLIMGTIGVS 287
            LG+  EQFG     +  G ++G+     L + LL  Q+  R L++      +M  + +S
Sbjct: 241 FLGVPTEQFGLYFACMVAGYIVGNLTAVRLGRRLLPDQILVRGLIIAVGGGSLMAVLALS 300

Query: 288 LTLDSIGFVAAMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALT 347
              +    +    L +I  GM +P  ++ AL  + + AGSA ALFG     +      L 
Sbjct: 301 EVFNVWAVILPQALFMIGTGMVLPQTMAGALANFPTMAGSASALFGFTQMAVAAIAGMLV 360

Query: 348 GLVQRLGVVLLMCAGITLLATLARSSHI 375
           G +   G  L+M + I   A +A   ++
Sbjct: 361 GHLHD-GTSLVMASIIAACAAIAMGCYL 387