Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., Bcr/CflA family multidrug efflux MFS transporter from Klebsiella michiganensis M5al

 Score =  115 bits (289), Expect = 2e-30
 Identities = 96/385 (24%), Positives = 184/385 (47%), Gaps = 24/385 (6%)

Query: 7   LWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADK 66
           ++++ ++ M   +   +Y P L  IA  F+V D  A  TLS Y L FALG +++G +AD 
Sbjct: 12  VFILGLLAMLMPLSIDMYLPALPVIAAQFNVPDGSAQMTLSTYILGFALGQLLYGPMADS 71

Query: 67  WGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHE 126
            GR+P +L G L++ +A      + +  +L+  R F     A  SVV   ++RD++   E
Sbjct: 72  LGRKPVILGGTLVFAAAAVACALSQTIDMLITMRFFHGLAAAAASVVINALMRDIYPKEE 131

Query: 127 LRKVFSLMGIGISISPVLGMLLGGQ-LAFAGGHQLVFL----ALFFIALVLFVYNLCQLP 181
             ++ S + +  +++P++  ++GG  L +   H + ++    AL   A++ F  +    P
Sbjct: 132 FSRMMSFVMLVTTVAPLVAPMVGGAVLVWFSWHAIFWILALAALLASAMIAFFISETLPP 191

Query: 182 E-TQQVKPKIALGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDLG-LDAEQ 239
           E  Q+   +  LG   A +F+ ++VL   L        +FS+   G F++ ++  +  + 
Sbjct: 192 ERRQKFHIRTTLGNF-ATLFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYININHVSPQH 250

Query: 240 FGY----SGIALGLGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLDSIGF 295
           FGY    + + L + ++I S   + + A  + +  L +  A+ + M    V   L  +GF
Sbjct: 251 FGYYFALNVVFLFVMTMINSRFVRRVGALNMFRAGLWIQFAMAVWM----VVCALFDVGF 306

Query: 296 VAAMILVVIAYG---MAIPNILSTALVEYKSQAGSAGALFGLLYY---LLIGSGLALTGL 349
            A +  V    G   M   N ++  L E+   AG+A +L G   +    ++G+ L++   
Sbjct: 307 WALVFGVAAFIGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGALLSMATF 366

Query: 350 VQR--LGVVLLMCAGITLLATLARS 372
                + + +  CA  ++L  L  S
Sbjct: 367 TTAWPMLISIAFCASSSILFYLYAS 391