Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Bcr/CflA family multidrug efflux MFS transporter from Klebsiella michiganensis M5al

 Score =  109 bits (273), Expect = 1e-28
 Identities = 80/350 (22%), Positives = 149/350 (42%), Gaps = 16/350 (4%)

Query: 23  IYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWGRRPTMLVGLLIYGS 82
           +Y P   ++ +  + S A  + +LS++   FALG + WG ++D++GR+P +L GL I+  
Sbjct: 25  MYLPAFAAMQQDLNTSAASVSASLSLFLAGFALGQLFWGPISDRYGRKPVLLSGLAIFAV 84

Query: 83  ATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELRKVFSLMGIGISISP 142
                +      +++  R   A G+   +V  Q ++ D +      ++F+ +   + +SP
Sbjct: 85  GCLGMLWVRDAGLMLALRFIQALGVCAAAVTWQAMVTDYYPAQRTNRIFAAIMPLVGLSP 144

Query: 143 VLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQVKPKIALGCLVARMFKD 202
            L  LLG  L      Q +F  LF I L+L +  L   P  + +   +        + + 
Sbjct: 145 ALAPLLGSWLLVHFEWQAIFAVLFAITLLLMLPALRLKPANKPI-VSVQQKLTFLALLRS 203

Query: 203 RQVLLSALLVALYNVALFSYYQLGAFIFSDLGLDAEQFGYSGIALGLGSLIGSFLNKTLL 262
           R+   + L+ A  + + F++     FI  D+G      G S +   +  L+G +  +  L
Sbjct: 204 REYSGNVLIYAACSASFFAWLTGSPFILHDMGYGPTVIGLSYVPQTIAFLVGGYGCRAAL 263

Query: 263 AKQVPQRALLLLAALLLI----MGTIGVSLTLDSIGFVAAMILVVIAYGMAIPNILSTAL 318
            K   Q+ L  L A+  +       +G+      +G +     + +  G   P +++ AL
Sbjct: 264 QKWQGQQILPWLLAIFAVSVAATWLVGLQENATLVGLMIPFCAMAVVNGGIYPIVVAQAL 323

Query: 319 VEYKSQAGSAGA-----------LFGLLYYLLIGSGLALTGLVQRLGVVL 357
             +    G A A           L  LL   LI + L  T  V  + +VL
Sbjct: 324 KPFPQATGRAAALQNTLQLGLCFLTSLLVSTLIATPLQTTTSVMLVSIVL 373