Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., drug resistance transporter, Bcr/CflA subfamily (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 99/383 (25%), Positives = 174/383 (45%), Gaps = 26/383 (6%)

Query: 3   TKPSLWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGV 62
           T P L  +V+M     +   ++ P L  +A  F    A    ++S+Y +  A+  ++ G 
Sbjct: 14  TPPHLATLVLMAGVAALSMNVFLPSLPGMAVYFDAEYAVMQLSVSLYLMMTAVLQLLVGP 73

Query: 63  LADKWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVF 122
           L+D++GRRP ML+   ++  AT  A+   +  + +  R+  A  IA   V+++ I+RD+ 
Sbjct: 74  LSDRYGRRPVMLISTALFALATLGAIFAPTVEVFLACRMAQAV-IASALVLSRAIVRDMV 132

Query: 123 SGHELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPE 182
              E   +   + +G++I P++G  LGG L    G +  F  LF  A+ +       L E
Sbjct: 133 GQAEAASLIGYVTMGMAIVPMIGPALGGLLDETFGWRASFWLLFAAAVAMLWLIWSDLGE 192

Query: 183 TQQVKPKIALGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDLGLDAEQFGY 242
           T   +     G   A++ +  ++L +         A F+     AF+     L +E FG 
Sbjct: 193 TAPNRS----GGFRAQVAEYPELLKARRFWGYVAAAAFASGVFFAFLGGAPYLGSEVFGL 248

Query: 243 SGIALG-------LGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGVSLTLDSIG- 294
           S   LG       LG ++G+FL+    + ++    ++L  +L+  +G +  S+ + + G 
Sbjct: 249 SPAILGIYFGAPALGYVLGNFLSGR-FSIRIGINRMILWGSLITSVG-MAASILIYAAGL 306

Query: 295 -----FVAAMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLA---L 346
                F A    V I  GM IPN  + +L      AG+A  L G    +++G G A   L
Sbjct: 307 THPLSFFALTATVGIGNGMIIPNATAGSLSVRPHLAGTASGLGGA---IMVGGGAAMSVL 363

Query: 347 TGLVQRLGVVLLMCAGITLLATL 369
            G++  LG        + LL +L
Sbjct: 364 AGILLPLGTGPYPLQALMLLTSL 386