Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., multidrug resistance transporter, Bcr family from Caulobacter crescentus NA1000

 Score =  116 bits (291), Expect = 1e-30
 Identities = 98/347 (28%), Positives = 165/347 (47%), Gaps = 28/347 (8%)

Query: 8   WLMVIML----MFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVL 63
           W +V++L     F  +   +Y   L SI R+ + +  Q   TL+ +F   A+G V +G  
Sbjct: 13  WRLVLLLGALTAFAPMSIDMYLSSLPSIGRTLNAAPDQTQATLAAFFAGMAIGQVFYGPA 72

Query: 64  ADKWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFS 123
           +D++GRRP +LVG+ ++ +A+ +     +   L+ AR   A G   G V+ + ++RD FS
Sbjct: 73  SDRFGRRPPLLVGVGLFIAASIVCAVAPNIETLIAARFVQALGGCAGPVIARAVVRDRFS 132

Query: 124 GHELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPET 183
             +  +V SLM + + ++PVL   LGG + F  G + VF  L    +++  + +  L E+
Sbjct: 133 HTDTARVLSLMTLIMGLAPVLAPQLGGVVQFVAGWRGVFWTLVMFGVLIAAWVVLSLTES 192

Query: 184 Q------QVKPKIALGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGA--FIFSDLGL 235
           +      Q + +  L   VA +F  R+++  AL  AL    LF+Y   GA   +    G 
Sbjct: 193 RSAATEAQARSENPLKAYVA-LFGMRRLMGYALAGALNGAVLFTYIS-GAPDLVMGTYGH 250

Query: 236 DAEQFGYSGIALGLGSLIGSFLNKTLLAKQVPQRALL------LLAALLLIMGT---IGV 286
               F        +G +  S +N+ LL +  P + L       ++AALLL +      G 
Sbjct: 251 SPLVFNLVFALNAVGIIGASQINRFLLRRSTPDQVLARASVASIVAALLLTLAAWTGFGG 310

Query: 287 SLTLDSIGFVAAMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFG 333
             T+  + F A  +     YG+   N ++ AL     +AGS  AL G
Sbjct: 311 QWTVLPLLFAALSL-----YGLMGGNTMAGALSVDPQRAGSTSALMG 352