Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  122 bits (307), Expect = 1e-32
 Identities = 103/392 (26%), Positives = 186/392 (47%), Gaps = 34/392 (8%)

Query: 9   LMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADKWG 68
           LM ++L+ P  ++ IY P + ++A  F+VS ++   TL ++  A  +G ++ G LAD++G
Sbjct: 9   LMSLVLLSPLAID-IYLPSMPTMAAEFAVSASEVQSTLVLFLFAMGVGQILIGPLADRYG 67

Query: 69  RRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHELR 128
           RRP  L G+L+YG+++ +A     F  L LARV         S+V  + +RD +S  E  
Sbjct: 68  RRPVALFGVLLYGASSLLAAAAIEFHWLQLARVLQGLAACSTSIVVFSAVRDCYSPKEGA 127

Query: 129 KVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQVKP 188
           +++S +   I + P L   LGG LA   G +  F+ +   A+++ +    +LPET+    
Sbjct: 128 RIYSYLNGAICVIPALAPTLGGLLAMQFGWRSTFVFMTLYAILMMLLVGYRLPETRPAN- 186

Query: 189 KIALGCL-----VARMFKDRQVLLSALLVALYNVALFSYYQLG-AFIFSDLGLDAEQFGY 242
            ++ G L        +  +   L  A        A+ SY      ++   LG+   +  +
Sbjct: 187 TVSSGPLYRWSRYKPVLSNTHFLFYAFACMSAMAAILSYVSYSPVWLIGHLGV--SELAF 244

Query: 243 SGIALGLGSLIG--SFLNKTLLAKQVPQRALLLLAALLLIMGT---IGVSLTLDSIGFVA 297
           SG+  GL +L+   +     ++ +++  R   +LA +LL++     I       S+G  A
Sbjct: 245 SGL-FGLNALVNIVACFAAPVVIRKLGNRPTAILALVLLVLSAVLIIAAQAFGPSVGMAA 303

Query: 298 A------MILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQ 351
           A      M+L+ I +   +    S AL  +  +AG+A A+ G   ++ +     + GLVQ
Sbjct: 304 AFAFMLPMMLLCIGFAFLLGPATSMALSAFGERAGTATAMLG---FIQMSGASVIAGLVQ 360

Query: 352 R------LGVVLLM---CAGITLLATLARSSH 374
           +        V L+M     G+  +  L+R  H
Sbjct: 361 QTSLTAPYAVALVMGVFSVGLLSMMALSRFDH 392