Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  110 bits (274), Expect = 9e-29
 Identities = 94/375 (25%), Positives = 172/375 (45%), Gaps = 14/375 (3%)

Query: 6   SLWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLAD 65
           SL L++   +   +   +Y P +  I +SFSVS  Q   TL++Y     LG +++G L+D
Sbjct: 20  SLLLLIPFDLLASLGMDLYLPAINDIRQSFSVSQGQMQLTLTLYMAILGLGQLLFGPLSD 79

Query: 66  KWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGH 125
             GRR  ++ G L+Y  ++     TDSF++ +L R+  A   +   V     +RDVF+  
Sbjct: 80  AIGRRRVVIAGALVYAGSSLAMALTDSFSVFLLLRIVQALSASAVLVAAFATVRDVFADR 139

Query: 126 ELRKV-FSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQ 184
           E   V +++MG  ++  PV+   +G  +      + +F  L   A ++ ++ L + PET+
Sbjct: 140 EEGVVIYAIMGSVLAAVPVVAPFIGSLIDGLWHWRGIFYTLAIFAALVGLHALLKWPETR 199

Query: 185 QVKPKIALGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSD-LGLDAEQFGYS 243
             +           + + +  L   L  A    A F Y+     I  D LGLD   F   
Sbjct: 200 PAQTHPFEWSRCFNIIRAKAFLGYTLAYATAMGAFFVYFSASPSILMDKLGLDKVTFSLW 259

Query: 244 GIALGLGSLIGSFLNKTLLAKQVPQRALLL-LAALLLIMGTI-------GVSLTLDSIGF 295
             ++ +  +I +   K L+ +   Q  +L  L  ++L  G +       G+SL    +GF
Sbjct: 260 FGSVAIVMIITTRFVKHLVKRWGTQGTVLRGLIGMMLSSGLLYGLEWLNGLSL----LGF 315

Query: 296 VAAMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQRLGV 355
           +  M  + +   +      + AL  +   AG A AL+  +  L + + ++L   +   G 
Sbjct: 316 MLPMYFIGVHIALTCAVTANGALAAFSHSAGLATALYYAIESLFLSALVSLLIWLLPSGT 375

Query: 356 VLLMCAGITLLATLA 370
            L++C+ I + A+L+
Sbjct: 376 TLVICSYILISASLS 390