Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., inner membrane transport protein YdhC (RefSeq) from Shewanella sp. ANA-3

 Score =  119 bits (299), Expect = 1e-31
 Identities = 87/376 (23%), Positives = 176/376 (46%), Gaps = 10/376 (2%)

Query: 7   LWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIWGVLADK 66
           L+ + ++ M   I   +Y P   +I  SF+ + +Q A +L+ +    ALG +I+G L  K
Sbjct: 17  LFYLALLSMLGFIATDMYLPAFKAIESSFNSTPSQVAMSLTCFLAGLALGQLIYGPLVSK 76

Query: 67  WGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRDVFSGHE 126
            G+R  +++GL I+  A+     +DS  +L +AR F A G     V+ Q I+ + +   +
Sbjct: 77  LGKRYALILGLGIFALASVAIANSDSILMLNIARFFQAVGACSAGVIWQAIVVEQYDAEK 136

Query: 127 LRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQLPETQQV 186
            + +FS +   +++SP L  +LG  +    G + +F++L  IA +L +  L  +P   + 
Sbjct: 137 AQGIFSNIMPLVALSPALAPILGAYILNDFGWRAIFISLCVIAFLLVLMTLYFVPSHAEH 196

Query: 187 KPKIALGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDLGLDAEQFGYSGIA 246
           +          ++ K+ + L + ++    + A F+Y  +   +    G  A + G S I 
Sbjct: 197 QDTRPSAVSYGQILKNTRYLGNVVIFGACSGAFFAYLTVWPIVMEQHGYQATEIGLSFIP 256

Query: 247 LGLGSLIGSFLNKTLLAKQVPQRALLLLAAL--LLIMGTIGVSLTLDSIGFVAAMI---L 301
             +  ++G + +K L+ +    R L +L A+  L ++  +  +L + +      +I   +
Sbjct: 257 QTIMFIVGGYASKLLIKRIGADRTLNVLLAIFGLCVISIVFFTLLMKAETIFPLLISFSI 316

Query: 302 VVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQRLGVV----- 356
           +  A G   P ++++AL ++   A  A  L   L   +     +L  L    G V     
Sbjct: 317 LAAANGAIYPIVVNSALQQFTQNAAKAAGLQNFLQITIAFGASSLVALWASSGEVAIGWG 376

Query: 357 LLMCAGITLLATLARS 372
           +L C+ + +L  L ++
Sbjct: 377 ILSCSLVVILGYLLKT 392