Pairwise Alignments

Query, 379 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., major facilitator transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  342 bits (877), Expect = 1e-98
 Identities = 184/374 (49%), Positives = 255/374 (68%), Gaps = 11/374 (2%)

Query: 1   MKTKPSLWLMVIMLMFPQIVETIYSPVLGSIARSFSVSDAQAAQTLSVYFLAFALGVVIW 60
           MK KP LWL V+++MFPQI+ETIYSP L +IA +F+VS   A+QTLSVYF+AFA+GV  W
Sbjct: 1   MKIKPPLWLCVLLMMFPQIMETIYSPALPNIAENFAVSVTSASQTLSVYFIAFAVGVFCW 60

Query: 61  GVLADKWGRRPTMLVGLLIYGSATFIAMQTDSFTILMLARVFSAFGIAVGSVVTQTILRD 120
           G LAD  GRR  ML GLL Y   +  A+    FT+L+ ARV SAFG AVGSV+TQT++RD
Sbjct: 61  GRLADIIGRRNAMLAGLLCYAIGSACALMISDFTLLLFARVLSAFGAAVGSVITQTMMRD 120

Query: 121 VFSGHELRKVFSLMGIGISISPVLGMLLGGQLAFAGGHQLVFLALFFIALVLFVYNLCQL 180
            ++G EL KVFS+MG+ + ISP++G+LLG  L+   G+Q VF+AL   A+VL   ++  L
Sbjct: 121 SYNGEELAKVFSVMGMSLGISPIIGLLLGSILSAYWGYQGVFVALMVSAIVLLFLSVKSL 180

Query: 181 PETQ-QVKPKIALGCLVARMFKDRQVLLSALLVALYNVALFSYYQLGAFIFSDLGLDAEQ 239
           PET+ +   KIA+  L  +M  D  ++ + LLVA +N+  FSY+ L  F+F   GL    
Sbjct: 181 PETKPEHTQKIAIVELAIKMLTDIGIIKNTLLVASFNLMWFSYFSLAPFMFEARGLSTLA 240

Query: 240 FGYSGIALGLGSLIGSFLNKTLLAKQVPQRALLLLAALLLIMGTIGV------SLTLDSI 293
           FG SG+ LG G+ +GS+ NK LL +      L+ LA+L+ + G +G+      ++ L+++
Sbjct: 241 FGASGLLLGFGAFLGSYFNKLLLGRGYSCALLVRLASLMALFGGLGIWLFQSTNIGLNNV 300

Query: 294 GFVAAMILVVIAYGMAIPNILSTALVEYKSQAGSAGALFGLLYYLLIGSGLALTGLVQRL 353
            F+  M+L+VIAYG+AIPNILS+AL  Y++ AGSAGALFGL YY+L+G GL   G+V  L
Sbjct: 301 YFLLPMLLIVIAYGIAIPNILSSALANYRAYAGSAGALFGLFYYILLGLGLGGAGMVSHL 360

Query: 354 GVVL----LMCAGI 363
           G V+    L+C G+
Sbjct: 361 GGVITLAALLCVGL 374