Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., Transcriptional regulator, AraC family from Acidovorax sp. GW101-3H11

 Score =  102 bits (253), Expect = 1e-26
 Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 18/237 (7%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H   Q+  +  G IR  ++    I+PP++A+WIP G  H   M      R++YF    
Sbjct: 64  HSHPWAQVAISTTGVIRLTVNHGTYIVPPSRALWIPPGVEHAVTMVEDADLRTLYFHQPR 123

Query: 94  FKCPDHIT-----------MIEVNALLKALIDKMAL----WSWDTPQESMN--NTTTLFW 136
            +C   +            ++EV+ LL+AL+ +M          TP E     + + L  
Sbjct: 124 GRCGPGVPRDQEDAWRQCRVLEVSDLLRALVREMPTAPDGGPATTPAELRREQHLSALVK 183

Query: 137 EEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAET 196
            E   A      + LP ++R +   + ++        L   A   GAS +TV RLF++E 
Sbjct: 184 GELARAAAVKLGVDLPQDKRLRHLCEAVLADPTRHDTLADWAQDTGASPRTVARLFRSEL 243

Query: 197 GMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFI 253
           G ++ +W+QQ  L KA+ L +   P+ Q++  LG+S+ SAF A  +K  GQ P  F+
Sbjct: 244 GSTFTQWRQQVILAKAVSLAAGRMPMGQIAAELGYSA-SAFSAMVRKSVGQPPGRFL 299