Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  105 bits (262), Expect = 1e-27
 Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 6/230 (2%)

Query: 30  DSGLHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYF 89
           ++  H H +GQL++  QG +    +     LPP  A W+P G +H   +   +    +  
Sbjct: 84  ETAWHAHVRGQLMYVEQGVLTVHTEHGTSSLPPGCAGWMPPGQQHTVELAGPLRGWGVVV 143

Query: 90  DCHAFK-CPDHITMIEVNALLKALIDKMALWSW-----DTPQESMNNTTTLFWEEFYAAQ 143
              A    P    +I ++ L + +I + A W       +    +      +  +E   A 
Sbjct: 144 RPDACSGLPARSGVIRLSGLAREVIMRAASWPLSAMLAEPVDPARQRLAAVLLDELCQAP 203

Query: 144 RQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEW 203
            +  HLP+P +RR     +QL+        L + A   G S ++++R F+ ETG+S+ +W
Sbjct: 204 IEHLHLPMPADRRLLRIARQLLDTPADPRPLEAWATWGGLSPRSLSRHFRDETGLSFAQW 263

Query: 204 KQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFI 253
           +QQ RL + +  LS+ T V QV+D LG+SS SAF++ F +  G  P  ++
Sbjct: 264 RQQARLAEGLRRLSQGTAVAQVADQLGYSSPSAFVSVFHRHFGAPPARYL 313