Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., AraC-type DNA-binding domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  344 bits (882), Expect = 1e-99
 Identities = 165/254 (64%), Positives = 201/254 (79%)

Query: 1   MAIIDQQTSFDPDRLPACVVGIAADIGNHDSGLHQHQKGQLLFAPQGCIRFALDDSICIL 60
           MAI+    +FD D   A V+GIAAD+G+HDSG+H+H KGQLL+APQGCI FA +D+I IL
Sbjct: 1   MAILQLGMAFDADAFSASVIGIAADVGSHDSGVHRHGKGQLLYAPQGCITFAWEDAIGIL 60

Query: 61  PPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHAFKCPDHITMIEVNALLKALIDKMALWS 120
           PPTKAVWIP  T HRA+MTNVVAYRS+YFDC     P  +TM++VN LLKALIDKMA W 
Sbjct: 61  PPTKAVWIPPHTPHRAVMTNVVAYRSLYFDCSRIVAPASVTMVDVNPLLKALIDKMAFWP 120

Query: 121 WDTPQESMNNTTTLFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANS 180
           WDTP+ SM ++  LFWEEFYAA+  +F L +P +RRF  FR+QL +  F  PD+ SLA +
Sbjct: 121 WDTPEASMTHSCALFWEEFYAARCHSFRLTIPVDRRFHGFRQQLFRPEFLPPDIDSLAAT 180

Query: 181 VGASSKTVTRLFKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAF 240
           +GAS+KTVTRLFK +TGMSYQEW+QQWRLLKAIELLS   PV++V   LGFSSDSAFIAF
Sbjct: 181 IGASTKTVTRLFKRDTGMSYQEWRQQWRLLKAIELLSGALPVSEVGFRLGFSSDSAFIAF 240

Query: 241 FKKQTGQTPLSFIK 254
           F+KQTG+TP  F++
Sbjct: 241 FRKQTGKTPRHFMQ 254