Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score = 93.2 bits (230), Expect = 5e-24
 Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 4/225 (1%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H   QL++A  G       +   ++PP +AVW+P+G  H          RS+Y    A
Sbjct: 23  HSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHCVRAARGGQNRSVYVTIEA 82

Query: 94  FKC---PDHITMIEVNALLKALIDKMALWSWDTPQESMNNTTT-LFWEEFYAAQRQTFHL 149
            +    P    ++ V+ L + LI +      D  ++  +     +  ++  A   Q  HL
Sbjct: 83  AQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADGRLVRVLLDQIAALPAQPLHL 142

Query: 150 PLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRL 209
           P P + R     + L         L   A   GAS++T+ R F+A+ G+++ +W+ + RL
Sbjct: 143 PWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLARTFRADCGLTFGQWRLRLRL 202

Query: 210 LKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFIK 254
           L A+E L+    V  V+  +G+   SAFIA F++  G TP ++ +
Sbjct: 203 LGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTPGAYFR 247