Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  108 bits (269), Expect = 2e-28
 Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 3/252 (1%)

Query: 8   TSFDPDRLPACVVGIAADIGNHDSGL--HQHQKGQLLFAPQGCIRFALDDSICILPPTKA 65
           + FDPD      V +  D  ++++ +  H+H++GQL+ A  G +     + + I+PP  A
Sbjct: 17  SDFDPDHWDGPAVALHVDFSDYEAEVPHHRHRQGQLIMALHGAVTCTAANGLWIVPPGSA 76

Query: 66  VWIPSGTRHRAIMTNVVAYRSIYFDCHAFKCPDHITMIEVNALLKALIDKMALWSW-DTP 124
           VWIP G  H   +T       ++ +  A   P     + V+ +L+ +I ++A  S  D P
Sbjct: 77  VWIPGGVSHSNQVTANARLSYLFVEPEAALLPQDCCTLSVSPMLREMILRLADASGHDEP 136

Query: 125 QESMNNTTTLFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGAS 184
           ++       +  +E          LP+  + +  +    L         L+  A+ V  S
Sbjct: 137 KDHRGRLVRVMLDELALMPTGGLKLPVSHHPKIAMIASALAAQPGDRRTLMEWASHVAMS 196

Query: 185 SKTVTRLFKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQ 244
            +++ RL   ETG+S+  W++Q  L+ A+  L+    V  VS  LG+ S +AFI  FKK 
Sbjct: 197 ERSLKRLMIQETGLSFGRWRRQLHLIVALRELASGASVQSVSLSLGYESATAFIVMFKKA 256

Query: 245 TGQTPLSFIKIR 256
            G TP  ++  R
Sbjct: 257 LGTTPARYLPNR 268