Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  125 bits (313), Expect = 1e-33
 Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 3/251 (1%)

Query: 10  FDPDRLPACVVGIAADIGNHDSG--LHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVW 67
           FDPD      V    D  +H +   +H+H+KGQL+ A  G +    D+ I I+PP  AVW
Sbjct: 11  FDPDLTDRPAVARQLDFADHQAEVPMHEHRKGQLILALHGAVTCTADNEIWIVPPNCAVW 70

Query: 68  IPSGTRHRAIMTNVVAYRSIYFDCHAFKCPDHITMIEVNALLKALIDKMALWSWDTPQES 127
           IP G  H A  T       ++ +  A K P+    + ++ +++ ++D++A    D P   
Sbjct: 71  IPGGVPHSARATANARLTYLFVEPGAAKLPEECCTLSISPMIREMVDRLAREPADYPSHG 130

Query: 128 -MNNTTTLFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSK 186
                  +  +E     R+ F+LP+  N + +     L         L   A  V  S +
Sbjct: 131 HAARLARVALDELVDMPRERFNLPISGNAKIRAIADALTVDPSDRSTLAEWAKRVAMSER 190

Query: 187 TVTRLFKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTG 246
           ++ RL   ETG+++  W+QQ  L+ A+  L+    V+ V+  LG+ S +AFI  FKK  G
Sbjct: 191 SLARLMIRETGLTFGRWRQQLHLVVALRQLAGGASVHTVAAELGYESVNAFITMFKKALG 250

Query: 247 QTPLSFIKIRR 257
            TP  +   RR
Sbjct: 251 STPAQYFVERR 261