Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score =  104 bits (259), Expect = 2e-27
 Identities = 70/237 (29%), Positives = 112/237 (47%), Gaps = 4/237 (1%)

Query: 19  VVGIAADIGNHDSGLHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIM 78
           V  ++ D     S  H H + QL++A  G +     D   ++PP++AVW+P+G  H    
Sbjct: 10  VAVVSQDAHRFASRRHSHPQAQLIYAITGVVSVTTADGTWVVPPSRAVWVPAGVEHDTKS 69

Query: 79  TNVVAYRSIYFDC-HAFKCPDHITMIEVNALLKALIDKMALWSWDTPQ--ESMNNTTTLF 135
            + V +RS+  D       P     +EV  LL+ LI ++   + D P   E     T L 
Sbjct: 70  HSAVQFRSLLIDAVEVMGLPVVCMAMEVTPLLRELILRLVAIA-DAPGSVELSRVVTQLL 128

Query: 136 WEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAE 195
             E  +   +   LP P +     F  Q+      +  L   A ++  S  +  RLF+ E
Sbjct: 129 LMELASLPVEPLSLPTPRHPPLARFCDQIRGEPAASVSLEQAARALHMSRASFMRLFQHE 188

Query: 196 TGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSF 252
           TGMS+  W+QQ RLL A+ LL++   +  V+   G+ S SAF A F++  G++P  +
Sbjct: 189 TGMSFLRWRQQARLLHALSLLAEGQSILNVALACGYDSPSAFSAMFRRVLGKSPSEY 245