Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score = 91.7 bits (226), Expect = 1e-23
 Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 2/223 (0%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H++ Q +    G      +    ++PP   +WIP+G  H++     V  ++IY   + 
Sbjct: 43  HLHRRDQFILQITGVTAMMTERGHFVVPPGHGLWIPAGVVHQSRAWGEVEAQTIYVTPNR 102

Query: 94  F-KCPDHITMIEVNALLKALIDKMALWSWDTPQESMNNTTTLFW-EEFYAAQRQTFHLPL 151
             K  D   +I  ++L++AL+D+         Q   + T   F   E       T H+ +
Sbjct: 103 ERKASDTCRLIRASSLVEALMDEAVRIPEIYDQNGRDGTLIEFLLTEIARMPEVTLHVQV 162

Query: 152 PTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLLK 211
           P + R     K ++        L   A+  G S +T+TRLF+ ETG S+  W+Q+ RLL+
Sbjct: 163 PPDPRLGEICKAVLVDPSSNLTLDHWADKCGLSRRTLTRLFRRETGQSFSGWRQRVRLLE 222

Query: 212 AIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFIK 254
           A+  L     V  V+  +G+ S SAF A FK++ G  P  +++
Sbjct: 223 ALARLGAGETVTGVALDVGYDSPSAFAAMFKRELGAAPRHYLR 265