Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  254 bits (648), Expect = 2e-72
 Identities = 125/255 (49%), Positives = 166/255 (65%), Gaps = 1/255 (0%)

Query: 1   MAIIDQQTSFDPDRLPACVVGIAADIGNHDSGLHQHQKGQLLFAPQGCIRFALDDSICIL 60
           MA ID+   FDPD +   VVGIAA +G HDSG+H H K QLL+APQGC+   LD   C+L
Sbjct: 1   MAFIDESCKFDPDAIETEVVGIAARLGQHDSGMHSHAKAQLLYAPQGCMTITLDGLHCVL 60

Query: 61  PPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHAF-KCPDHITMIEVNALLKALIDKMALW 119
           PPT+A WIP   RH  +M  VV YRS+YF         + I ++EV  LL+AL+++MA W
Sbjct: 61  PPTRAAWIPPACRHSVVMNRVVDYRSLYFAPQLTGSIANRIQILEVTPLLQALVERMAFW 120

Query: 120 SWDTPQESMNNTTTLFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLAN 179
            WD    +M NT  LF+EE   A+     LP+P++RR + +  +L +A +  P L  L  
Sbjct: 121 PWDKSAMAMVNTYQLFFEELSQAKESHLVLPMPSDRRLQTWLAELQRAPWDVPPLKQLGQ 180

Query: 180 SVGASSKTVTRLFKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIA 239
            +GASSKT++R+F  +TGM YQ W+QQWRL +AI LL+    VN V+  L FSSDSAFIA
Sbjct: 181 QLGASSKTISRIFTRQTGMPYQNWRQQWRLQQAIALLASGYQVNDVAYRLAFSSDSAFIA 240

Query: 240 FFKKQTGQTPLSFIK 254
           FFK+ TG TPL +++
Sbjct: 241 FFKQHTGSTPLQYLQ 255