Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  101 bits (252), Expect = 1e-26
 Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 7/224 (3%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H   QL++A  G +  + ++S  I+ P +A+W+P+   HR      V+ RS+YF   A
Sbjct: 36  HWHHAAQLIYAESGVMELSCEESFWIISPQQALWMPAELPHRLKARGQVSLRSVYFQPDA 95

Query: 94  FKCPDHITM----IEVNALLKALIDK-MALWSWDTPQESMNNTTTLFWEEFYAAQRQTFH 148
              P+  +     + V+ LL+ L+   M + S   P     +   L   E   AQ     
Sbjct: 96  L--PERFSKQPQSLVVSPLLRELMKSAMPVTSSSQPSSREVHLMQLLMSEIGWAQEIPLK 153

Query: 149 LPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWR 208
           LP+P + R +     L+        L      VGAS +T++RLF+ + G S+  W+QQ R
Sbjct: 154 LPMPKDNRLQKICLGLLADPGNDCTLSQWGEIVGASPRTLSRLFQTQLGTSFAIWRQQAR 213

Query: 209 LLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSF 252
           +  AI  L+   P+ +V+  +G+ S  AF + FKK  G TP  F
Sbjct: 214 IFAAIPRLNLGEPIVRVAMEMGYDSAGAFASAFKKMMGVTPSEF 257