Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., DNA-binding domain-containing protein, AraC-type from Dechlorosoma suillum PS

 Score =  125 bits (314), Expect = 9e-34
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 4/223 (1%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H   QL +   G IR A  D   I+PP +A+WIP    H  +M   V  R++Y D  A
Sbjct: 40  HSHDWAQLAYPIAGTIRLATADMAWIVPPLRAIWIPPQVAHTVVMLGQVELRTLYVDAAA 99

Query: 94  FKCP-DHITMIEVNALLKALIDKMALWSWDTPQESMNNT-TTLFWEEFYAAQRQTFHLPL 151
              P D   ++E++ +++AL + +A  +   P E      T L  EE   A+  +  LPL
Sbjct: 100 APLPLDSCRVVEISDVMRALSEALA--ASPAPAEPRRGLMTALLVEEMRQAKPLSLGLPL 157

Query: 152 PTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLLK 211
           P +RR     + L+        L + A  VGASS+T+ RLF+ E  M +  W+QQ RL +
Sbjct: 158 PRDRRLMALCQALLDQPAADLSLEAWAARVGASSRTLARLFQKELAMPFGAWRQQLRLSR 217

Query: 212 AIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFIK 254
           A  L+++   +  V+  LG++S SAF A FK+  GQ+P  F +
Sbjct: 218 AAALVAQGRSLGAVAAELGYASPSAFSAMFKRAFGQSPRQFFR 260