Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., transcriptional regulator, AraC family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  107 bits (267), Expect = 2e-28
 Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 6/225 (2%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           H H   Q  +A +G +         + PP +A+WIP+G  H  + +     RS+Y D  A
Sbjct: 33  HSHDWVQFSYAVRGVLEIRTRQGSHMAPPQRAIWIPAGLPHEVMTSGPAEQRSLYIDPAA 92

Query: 94  FK-----CPDHITMIEVNALLKALIDKMALWSWDTPQESM-NNTTTLFWEEFYAAQRQTF 147
                   P    ++EV  L + L+        D  +         +  +E  A      
Sbjct: 93  LAPLWGTAPARCRVVEVTPLARELVLAFTRLPRDYDEHGAPGRLVGVLLDELVALPEAGL 152

Query: 148 HLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQW 207
            LPLP + R     + ++ A      L  LA   G S +T+TRLF+AETG+S +EW+Q+ 
Sbjct: 153 SLPLPADARLAALCEAMLDAPGEDHSLPRLAARAGMSDRTLTRLFRAETGLSLREWRQRA 212

Query: 208 RLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSF 252
           R+L A+  L +   V  V+  +G+ S SAFIA F++  G+TP  F
Sbjct: 213 RMLAALPELERGHGVTAVALEMGYDSTSAFIAAFRQLMGRTPGEF 257