Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., AraC/XylS familytranscription regulator from Klebsiella michiganensis M5al

 Score =  201 bits (512), Expect = 9e-57
 Identities = 103/254 (40%), Positives = 155/254 (61%), Gaps = 10/254 (3%)

Query: 1   MAIIDQQTSFDPDRLPACVVGIAADIGNHDSGLHQHQKGQLLFAPQGCIRFALDDS--IC 58
           MA +D   +FDPD L   ++G+ + +G+HDSG HQH+  Q+LF  QGC+R  L+D   +C
Sbjct: 1   MAWLDADAAFDPDTLKTHLIGVQSALGDHDSGSHQHKMAQILFTRQGCVRLTLNDGALLC 60

Query: 59  ILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHAF-KCPDHITMIEVNALLKALIDKMA 117
           +LPP +A WIP+  RHRA M N+V YRS++F    + + P    ++ V  LL+ L+++++
Sbjct: 61  LLPPGRAAWIPAEVRHRAEMKNIVDYRSVWFQPQRYPQLPTQSAILNVVPLLRELLERIS 120

Query: 118 LWSWDTPQES--MNNTTTLFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLV 175
              WDT  E+    +   L   E   A R+   L LP ++R       ++      P L 
Sbjct: 121 ASPWDTDWEAEPARHLAALCQAEIRLAAREPMMLALPQDKRLA-----MVCGDALPPALG 175

Query: 176 SLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDS 235
           +LA   GAS KT++RLF+ +TGM+YQ+W+QQWRL+KA+E+L+    +   +  L F+SDS
Sbjct: 176 ALAARCGASEKTISRLFRRDTGMTYQQWRQQWRLMKAVEMLATGERITDTAQALDFASDS 235

Query: 236 AFIAFFKKQTGQTP 249
           AFI FF+  TG TP
Sbjct: 236 AFIYFFRTMTGMTP 249