Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., AraC family transcriptional regulator from Klebsiella michiganensis M5al

 Score =  100 bits (249), Expect = 3e-26
 Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 9/221 (4%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           HQH+KGQL+ A  G +   +++++ ++PP  AVW+P    H    T       ++ +  A
Sbjct: 35  HQHRKGQLILALHGALTCEVENAMWMVPPQYAVWVPGQVSHSNRATPEAQVCFLFIEPDA 94

Query: 94  FKCPDHITMIEVNALLKALIDKMA-LWSWDTPQESMNNTTTLFWEEFYAAQRQTFHLPLP 152
              P     ++++ L++ LI  MA     +  + +MN    + ++E    Q+   HL LP
Sbjct: 95  AAMPAFCCTLKISPLVRELILVMAERGRAELAKPAMNRLVQVLFDEL--PQQPQEHLQLP 152

Query: 153 TNRRFKVFRKQLMQATFFAP----DLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWR 208
            +   K+  +Q++      P     L   A     S + + RL   ETG+S++ W+ Q +
Sbjct: 153 VSGHPKI--RQMVDTMAVDPARWQTLAQWAAEFAMSERNLARLVVRETGLSFRRWRHQLQ 210

Query: 209 LLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTP 249
           L+ ++++L +   V Q +  LG+ S +AFI  FKK  GQTP
Sbjct: 211 LILSLQMLVRGQTVQQTAQSLGYDSTTAFITMFKKGLGQTP 251