Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., AraC-type DNA-binding domain-containing protein from Klebsiella michiganensis M5al

 Score =  103 bits (257), Expect = 4e-27
 Identities = 72/249 (28%), Positives = 121/249 (48%), Gaps = 8/249 (3%)

Query: 11  DPDRLPACVVGIAADIG-NHDSGLHQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIP 69
           D D LP  V+ + +D   N     H H++ Q L+A  G ++   DD   ++PP   VWIP
Sbjct: 8   DVDHLPRPVLALGSDYPPNTLLERHSHRRAQFLYAMHGLMKVETDDGQWLVPPFSGVWIP 67

Query: 70  SGTRHRAIMTNVVAYRSIYFDCH-AFKCPDHITMIEVNALLKALI---DKMALWSWDTPQ 125
           +   HR  M  V  + S+Y D   A +  +   +++V+ L+  L+    ++ L   ++ +
Sbjct: 68  ATKPHRVWMPGVSTH-SLYIDARDAPRESERCEVLQVSPLIHQLLLAACRLPLLYEESGR 126

Query: 126 ESMNNTTTLFWEEFYAAQRQTFHLPLPTNRRFKVFRKQLMQATFFAPDLVSLANSVGASS 185
           ++     TL   E  AA       PLP N R         +           A  +  S 
Sbjct: 127 DAA--LITLLLHELRAAAPLPMFTPLPQNSRLAALCADFQRQPSIRSTPQQWAQKLSKSV 184

Query: 186 KTVTRLFKAETGMSYQEWKQQWRLLKAIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQT 245
           +T  RLF+ ETGM++ +W+QQ  L+ A+  L + + V +V+  LG+   +AF A F+K  
Sbjct: 185 RTFNRLFRRETGMAFCDWRQQACLMYAMTALREGSSVTEVALSLGYEYPAAFTAMFRKAM 244

Query: 246 GQTPLSFIK 254
           G +P++FI+
Sbjct: 245 GYSPMAFIR 253