Pairwise Alignments

Query, 257 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., HTH-type transcriptional regulator NimR from Enterobacter sp. TBS_079

 Score =  113 bits (282), Expect = 4e-30
 Identities = 70/223 (31%), Positives = 115/223 (51%), Gaps = 2/223 (0%)

Query: 34  HQHQKGQLLFAPQGCIRFALDDSICILPPTKAVWIPSGTRHRAIMTNVVAYRSIYFDCHA 93
           HQH   QLL    G +R        ++PP + VW+P+GT H   +T  VA R+++ D  A
Sbjct: 30  HQHDCAQLLHTLSGVVRVDTASGCWVVPPGRGVWLPAGTPHSLRITGNVAARTLFIDPLA 89

Query: 94  -FKCPDHITMIEVNALLKALI-DKMALWSWDTPQESMNNTTTLFWEEFYAAQRQTFHLPL 151
               P    +++++ LL+ LI   + L +  +P         L  +E    +   FHLP 
Sbjct: 90  RADLPATCQIVQISGLLRELILTSLTLEASYSPGSRDERVYELILDEIRTMRVLPFHLPE 149

Query: 152 PTNRRFKVFRKQLMQATFFAPDLVSLANSVGASSKTVTRLFKAETGMSYQEWKQQWRLLK 211
           P +   +   +Q+      +   +  AN++G S +T+ R FK +TG+SY EW ++ RLL+
Sbjct: 150 PESEPLRTLCQQIRLLPGESWGSMQAANTLGMSERTMNRHFKQQTGLSYGEWLRRARLLE 209

Query: 212 AIELLSKETPVNQVSDWLGFSSDSAFIAFFKKQTGQTPLSFIK 254
           A+  L +  PV +V+  LG+ S SAF A F++  G +P  + K
Sbjct: 210 ALLRLGQGQPVLRVALDLGYGSHSAFTAMFRRVMGISPSDYFK 252